RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g36700.1 View Network Show in Genome Browser |
| Other Names | Os06g0562600 |
| Description | T-complex protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 21598229-21602687 Nucleotide Length: 1608 |
| Protein-coding | LOC_Os06g36700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g46620 LOC_Os06g34690 LOC_Os02g14929 LOC_Os05g05470 LOC_Os06g09679 LOC_Os02g54060 LOC_Os03g25050 LOC_Os03g59020 LOC_Os06g09688 LOC_Os02g22780 LOC_Os01g10820 More.. |
| Downstream Genes | LOC_Os09g26730 LOC_Os07g44740 LOC_Os06g47320 LOC_Os08g03640 LOC_Os10g37060 LOC_Os11g04070 LOC_Os12g03880 LOC_Os07g47780 LOC_Os07g46990 LOC_Os12g43630 LOC_Os10g41710 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g36700.1 |
| Rice Genome Annotation | LOC_Os06g36700.1 |
| Ricechip | LOC_Os06g36700.1 |
| KEGG | osa:4341310 dosa:Os06t0562600-01 |
| Entrez-Gene | 4341310 |