RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g36770.3 View Network Show in Genome Browser |
| Other Names | Os06g0563300 |
| Description | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 21656116-21662471 Nucleotide Length: 1302 |
| Protein-coding | LOC_Os06g36770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g07150 LOC_Os03g59060 LOC_Os02g28810 LOC_Os04g28180 LOC_Os01g08310 LOC_Os03g05720 LOC_Os02g30050 LOC_Os03g31090 LOC_Os05g28750 LOC_Os01g19840 LOC_Os06g03970 More.. |
| Downstream Genes | LOC_Os10g27050 LOC_Os09g07510 LOC_Os07g30100 LOC_Os11g38959 LOC_Os08g32650 LOC_Os09g31180 LOC_Os06g37660 LOC_Os07g42170 LOC_Os10g38950 LOC_Os08g06060 LOC_Os10g01480 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5806 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g36770.3 |
| Rice Genome Annotation | LOC_Os06g36770.3 |
| Ricechip | LOC_Os06g36770.3 |
| KEGG | osa:4341313 dosa:Os06t0563300-01 |
| Entrez-Gene | 4341313 |