RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g36830.1 View Network Show in Genome Browser |
| Other Names | Os06g0564400 |
| Description | cysteine synthase, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 21695602-21699561 Nucleotide Length: 1200 |
| Protein-coding | LOC_Os06g36830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g54800 LOC_Os06g12150 LOC_Os02g51410 LOC_Os04g32880 LOC_Os03g63940 LOC_Os06g20390 LOC_Os03g47120 LOC_Os01g01302 LOC_Os03g03430 LOC_Os05g32850 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn01100 rn00920 rn01120 |
| Metacyc Pathways | CYSTSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g36830.1 |
| Rice Genome Annotation | LOC_Os06g36830.1 |
| Ricechip | LOC_Os06g36830.1 |
| KEGG | dosa:Os06t0564400-00 |