RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g36940.1 View Network Show in Genome Browser |
| Other Names | Os06g0565300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 21763118-21765044 Nucleotide Length: 1080 |
| Protein-coding | LOC_Os06g36940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g16430 LOC_Os04g33050 LOC_Os03g51870 LOC_Os03g59530 LOC_Os03g03560 LOC_Os05g46780 |
| Downstream Genes | LOC_Os11g43970 LOC_Os11g07050 LOC_Os10g34580 LOC_Os08g41710 LOC_Os08g23680 LOC_Os07g09320 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g36940.1 |
| Rice Genome Annotation | LOC_Os06g36940.1 |
| Ricechip | LOC_Os06g36940.1 |
| KEGG | osa:4341327 dosa:Os06t0565300-00 |
| Entrez-Gene | 4341327 |