RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g36990.1 View Network Show in Genome Browser
Other Names	Os06g0565900
Description	phospholipid-transporting ATPase 4, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 21809428-21815008 Nucleotide Length: 3669
Protein-coding	LOC_Os06g36990

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0005215	transporter activity	Molecular Function	IEA
GO:0016020	membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g22090 LOC_Os04g58580 LOC_Os04g56160 LOC_Os02g07630 LOC_Os02g12794 LOC_Os02g12800 LOC_Os01g09460 LOC_Os02g10290 LOC_Os05g06750 LOC_Os01g22520 LOC_Os03g58840 More..
Downstream Genes	LOC_Os12g29660 LOC_Os07g37100 LOC_Os06g37440 LOC_Os07g37110 LOC_Os08g21760 LOC_Os07g16950 LOC_Os09g07510 LOC_Os10g40590 LOC_Os10g37420 LOC_Os12g44150 LOC_Os07g09600 More..

miRNA Regulations
miRNAs	osa-miR390-3p

Pathways
KEGG Pathways	rn00230 rn00680

Database Links
Gramene	LOC_Os06g36990.1
Rice Genome Annotation	LOC_Os06g36990.1
Ricechip	LOC_Os06g36990.1
KEGG	osa:4341328 dosa:Os06t0565900-01
Entrez-Gene	4341328