RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g37000.1 View Network Show in Genome Browser |
| Other Names | Os06g0566100 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 21818242-21823081 Nucleotide Length: 858 |
| Protein-coding | LOC_Os06g37000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17010 LOC_Os02g05310 LOC_Os04g39444 LOC_Os03g59710 LOC_Os02g37430 LOC_Os02g39720 LOC_Os02g07070 LOC_Os02g39890 LOC_Os03g50850 LOC_Os02g58090 LOC_Os02g04480 More.. |
| Downstream Genes | LOC_Os08g37960 LOC_Os07g47630 LOC_Os09g37720 LOC_Os11g43620 LOC_Os08g05530 LOC_Os12g39400 LOC_Os11g37080 LOC_Os10g06130 LOC_Os09g12800 LOC_Os07g19560 LOC_Os12g44390 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g37000.1 |
| Rice Genome Annotation | LOC_Os06g37000.1 |
| Ricechip | LOC_Os06g37000.1 |
| KEGG | osa:4341330 dosa:Os06t0566100-01 |
| Entrez-Gene | 4341330 |