RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g37300.1 View Network Show in Genome Browser
Other Names	Os06g0569500
Description	cytochrome P450, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 22020840-22028146 Nucleotide Length: 1533
Protein-coding	LOC_Os06g37300

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0019825	oxygen binding	Molecular Function	IEA
GO:0005623	cell	Cellular Component	IEA
GO:0005783	endoplasmic reticulum	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os05g40384 LOC_Os01g41820 LOC_Os01g41810 LOC_Os02g11020 LOC_Os01g43760 LOC_Os01g43750 LOC_Os01g43740 LOC_Os03g04530 LOC_Os03g21400 LOC_Os01g43720
Downstream Genes	LOC_Os11g29290 LOC_Os12g02630 LOC_Os12g05440 LOC_Os07g45000 LOC_Os09g36370

miRNA Regulations
miRNAs	osa-miR812a osa-miR812b osa-miR812c osa-miR812d osa-miR812e

Pathways
KEGG Pathways	rn00904 rn01100 rn01110
Metacyc Pathways	PWY-5034 PWY-5047

Reference
PubMed	22247270 16299167

Database Links
Gramene	LOC_Os06g37300.1
Rice Genome Annotation	LOC_Os06g37300.1
Ricechip	LOC_Os06g37300.1
KEGG	osa:4341343 dosa:Os06t0569500-01
Entrez-Gene	4341343