RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g37420.1 View Network Show in Genome Browser |
| Other Names | Os06g0571100 |
| Description | histone deacetylase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 22123242-22127368 Nucleotide Length: 1059 |
| Protein-coding | LOC_Os06g37420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g56070 LOC_Os01g16260 LOC_Os01g17214 LOC_Os03g60550 |
| Downstream Genes | LOC_Os12g03860 LOC_Os11g04030 LOC_Os07g41090 LOC_Os11g04020 LOC_Os11g04104 LOC_Os12g03899 LOC_Os12g03830 LOC_Os12g03870 LOC_Os11g04060 LOC_Os11g04150 LOC_Os07g08300 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g37420.1 |
| Rice Genome Annotation | LOC_Os06g37420.1 |
| Ricechip | LOC_Os06g37420.1 |
| KEGG | osa:4341352 dosa:Os06t0571100-01 |
| Entrez-Gene | 4341352 |