RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g38550.1 View Network Show in Genome Browser |
| Other Names | Os06g0584200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 22836854-22839540 Nucleotide Length: 2019 |
| Protein-coding | LOC_Os06g38550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g48240 LOC_Os04g42370 LOC_Os05g06280 LOC_Os01g49690 LOC_Os01g68710 LOC_Os03g03830 LOC_Os05g23600 |
| Downstream Genes | LOC_Os11g07280 LOC_Os12g07670 LOC_Os11g37480 LOC_Os06g50818 LOC_Os06g50742 LOC_Os06g50706 LOC_Os06g50670 LOC_Os06g50590 LOC_Os06g50580 LOC_Os06g50539 LOC_Os06g50490 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-4021 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g38550.1 |
| Rice Genome Annotation | LOC_Os06g38550.1 |
| Ricechip | LOC_Os06g38550.1 |
| KEGG | dosa:Os06t0584200-01 |