RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g38940.1 View Network Show in Genome Browser |
| Other Names | Os06g0588900 |
| Description | RMD5 homolog A, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 23098857-23102037 Nucleotide Length: 1161 |
| Protein-coding | LOC_Os06g38940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g06760 LOC_Os02g35070 LOC_Os03g13220 LOC_Os01g21940 LOC_Os03g14980 LOC_Os02g19210 LOC_Os01g15020 LOC_Os03g49150 LOC_Os05g33260 LOC_Os03g24600 LOC_Os01g47540 More.. |
| Downstream Genes | LOC_Os10g24070 LOC_Os07g29420 LOC_Os12g01170 LOC_Os11g01170 LOC_Os07g22220 LOC_Os08g15040 LOC_Os07g09600 LOC_Os09g39490 LOC_Os07g07310 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g38940.1 |
| Rice Genome Annotation | LOC_Os06g38940.1 |
| Ricechip | LOC_Os06g38940.1 |
| KEGG | osa:4341403 dosa:Os06t0588900-01 |
| Entrez-Gene | 4341403 |