RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g38960.1 View Network Show in Genome Browser |
| Other Names | Os06g0589500 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 23119058-23122451 Nucleotide Length: 1041 |
| Protein-coding | LOC_Os06g38960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g64320 LOC_Os04g54870 LOC_Os03g59210 LOC_Os01g16030 LOC_Os01g51840 LOC_Os01g67190 LOC_Os05g03174 LOC_Os02g34430 LOC_Os01g73980 LOC_Os01g59150 LOC_Os02g33550 More.. |
| Downstream Genes | LOC_Os11g26190 LOC_Os09g13650 LOC_Os07g45060 LOC_Os07g02810 LOC_Os07g44350 LOC_Os06g43620 LOC_Os07g38060 LOC_Os12g01740 LOC_Os11g01740 LOC_Os12g01560 LOC_Os11g01570 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g38960.1 |
| Rice Genome Annotation | LOC_Os06g38960.1 |
| Ricechip | LOC_Os06g38960.1 |
| KEGG | osa:4341406 dosa:Os06t0589500-01 |
| Entrez-Gene | 4341406 |