RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g39040.1 View Network Show in Genome Browser |
| Other Names | Os06g0590301 |
| Description | dehydrogenase/reductase SDR family member 12, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 23181234-23184507 Nucleotide Length: 963 |
| Protein-coding | LOC_Os06g39040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g41960 LOC_Os01g66720 LOC_Os04g30420 LOC_Os03g01190 LOC_Os02g56180 LOC_Os01g54940 LOC_Os02g56300 LOC_Os03g10790 LOC_Os03g14800 |
| Downstream Genes | LOC_Os11g01154 LOC_Os08g01760 LOC_Os12g01160 LOC_Os12g03960 LOC_Os11g04160 LOC_Os12g32180 LOC_Os08g04270 LOC_Os10g11200 |
| Pathways | |
|---|---|
| Metacyc Pathways | ENTBACSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g39040.1 |
| Rice Genome Annotation | LOC_Os06g39040.1 |
| Ricechip | LOC_Os06g39040.1 |
| KEGG | osa:9267040 dosa:Os06t0590301-01 |
| Entrez-Gene | 9267040 |