RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g39344.1 View Network Show in Genome Browser |
| Other Names | Os06g0594100 |
| Description | enoyl-CoA hydratase/isomerase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 23343928-23350820 Nucleotide Length: 1305 |
| Protein-coding | LOC_Os06g39344 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g38570 |
| Downstream Genes | LOC_Os06g46372 LOC_Os07g09060 LOC_Os12g16350 LOC_Os10g42220 LOC_Os11g39220 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00410 rn00640 rn00720 rn01100 rn01120 rn00071 rn00310 rn00362 rn00380 rn00627 rn00650 rn00280 rn01110 rn00062 rn00360 rn00930 rn00281 rn00903 rn00592 |
| Metacyc Pathways | VALDEG-PWY P3-PWY P127-PWY CENTFERM-PWY PWY-5177 PWY-5138 PWY-5080 PWY-5136 FAO-PWY PWY-3941 ILEUDEG-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g39344.1 |
| Rice Genome Annotation | LOC_Os06g39344.1 |
| Ricechip | LOC_Os06g39344.1 |
| KEGG | osa:4341424 dosa:Os06t0594100-01 |
| Entrez-Gene | 4341424 |