RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g39520.2 View Network Show in Genome Browser |
| Other Names | Os06g0596300 |
| Description | myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 23467234-23471693 Nucleotide Length: 1074 |
| Protein-coding | LOC_Os06g39520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51430 |
| Downstream Genes | LOC_Os09g25490 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1442 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00061 rn01100 |
| Metacyc Pathways | PWY-5142 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g39520.2 |
| Rice Genome Annotation | LOC_Os06g39520.2 |
| Ricechip | LOC_Os06g39520.2 |
| KEGG | osa:4341431 dosa:Os06t0596300-01 |
| Entrez-Gene | 4341431 |