RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g39590.2 View Network Show in Genome Browser |
| Other Names | Os06g0597000 |
| Description | OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 23501973-23503503 Nucleotide Length: 501 |
| Protein-coding | LOC_Os06g39590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g24600 LOC_Os01g51120 |
| Reference | |
|---|---|
| PubMed | 21736653 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g39590.2 |
| Rice Genome Annotation | LOC_Os06g39590.2 |
| Ricechip | LOC_Os06g39590.2 |
| KEGG | osa:4341432 dosa:Os06t0597000-02 |
| Entrez-Gene | 4341432 |