RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g39880.1 View Network Show in Genome Browser |
| Other Names | Os06g0600400 |
| Description | cytochrome P450 72A1, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 23704714-23707248 Nucleotide Length: 1617 |
| Protein-coding | LOC_Os06g39880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0019825 | oxygen binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11300 LOC_Os01g11340 LOC_Os01g11270 LOC_Os01g11280 LOC_Os03g20570 LOC_Os04g58110 LOC_Os04g39430 LOC_Os01g24810 LOC_Os02g07160 LOC_Os04g51940 LOC_Os05g51550 More.. |
| Downstream Genes | LOC_Os10g34480 LOC_Os09g36370 LOC_Os08g12760 LOC_Os11g04710 LOC_Os11g27730 LOC_Os06g42610 LOC_Os12g04480 LOC_Os08g16320 LOC_Os08g01470 LOC_Os07g22600 LOC_Os08g03682 More.. |
| Reference | |
|---|---|
| PubMed | 21418356 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g39880.1 |
| Rice Genome Annotation | LOC_Os06g39880.1 |
| Ricechip | LOC_Os06g39880.1 |
| KEGG | osa:4341450 dosa:Os06t0600400-01 |
| Entrez-Gene | 4341450 |