RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g40040.1 View Network Show in Genome Browser |
| Other Names | Os06g0602600 |
| Description | protein of unknown function domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 23821372-23823339 Nucleotide Length: 399 |
| Protein-coding | LOC_Os06g40040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g57590 LOC_Os01g73160 LOC_Os03g29460 LOC_Os01g59990 LOC_Os02g14059 LOC_Os01g49290 LOC_Os05g40820 LOC_Os03g01910 LOC_Os02g07890 LOC_Os05g11710 LOC_Os04g39700 More.. |
| Downstream Genes | LOC_Os09g37006 LOC_Os09g29840 LOC_Os10g34180 LOC_Os10g32550 LOC_Os12g38000 LOC_Os09g08430 LOC_Os07g20580 LOC_Os11g37080 LOC_Os07g33997 LOC_Os07g33921 LOC_Os07g33898 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g40040.1 |
| Rice Genome Annotation | LOC_Os06g40040.1 |
| Ricechip | LOC_Os06g40040.1 |
| KEGG | osa:4341459 dosa:Os06t0602600-01 |
| Entrez-Gene | 4341459 |