RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g40170.1 View Network Show in Genome Browser |
| Other Names | Os06g0604200 |
| Description | phospholipase D, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 23908918-23913797 Nucleotide Length: 2499 |
| Protein-coding | LOC_Os06g40170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR419 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00565 rn00564 rn01100 |
| Metacyc Pathways | PWY-3561 LIPASYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g40170.1 |
| Rice Genome Annotation | LOC_Os06g40170.1 |
| Ricechip | LOC_Os06g40170.1 |
| KEGG | osa:4341467 dosa:Os06t0604200-02 |
| Entrez-Gene | 4341467 |