RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g40200.2 View Network Show in Genome Browser |
| Other Names | Os06g0604500 |
| Description | calcium-binding mitochondrial carrier CBG00135, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 23935975-23942393 Nucleotide Length: 1548 |
| Protein-coding | LOC_Os06g40200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g41210 LOC_Os03g20370 LOC_Os01g16240 LOC_Os01g17190 LOC_Os03g59590 LOC_Os01g62570 LOC_Os01g59530 LOC_Os03g18010 LOC_Os05g03610 LOC_Os02g48740 LOC_Os01g33080 More.. |
| Downstream Genes | LOC_Os07g48780 LOC_Os12g37560 LOC_Os11g38900 LOC_Os07g49330 LOC_Os10g25010 LOC_Os12g03816 LOC_Os12g06510 LOC_Os09g36770 LOC_Os12g40510 LOC_Os10g41510 LOC_Os09g34970 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g40200.2 |
| Rice Genome Annotation | LOC_Os06g40200.2 |
| Ricechip | LOC_Os06g40200.2 |
| KEGG | osa:4341470 dosa:Os06t0604500-01 |
| Entrez-Gene | 4341470 |