RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g40450.1 View Network Show in Genome Browser |
| Other Names | Os06g0606800 |
| Description | targeting protein for Xklp2, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 24091282-24096110 Nucleotide Length: 1122 |
| Protein-coding | LOC_Os06g40450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g42600 LOC_Os01g17250 LOC_Os03g11720 LOC_Os03g03770 LOC_Os02g40410 LOC_Os03g57100 LOC_Os03g19990 LOC_Os03g45410 LOC_Os05g51140 LOC_Os03g62370 |
| Downstream Genes | LOC_Os10g38980 LOC_Os11g38900 LOC_Os07g25420 LOC_Os06g47320 LOC_Os08g07760 LOC_Os08g06470 LOC_Os11g39650 LOC_Os07g44410 LOC_Os07g45090 LOC_Os10g42540 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2275d |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g40450.1 |
| Rice Genome Annotation | LOC_Os06g40450.1 |
| Ricechip | LOC_Os06g40450.1 |
| KEGG | osa:4341479 dosa:Os06t0606800-01 |
| Entrez-Gene | 4341479 |