RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os06g40560.1 View Network Show in Genome Browser |
Other Names | Os06g0607800 |
Description | 26S protease regulatory subunit S10B, putative, expressed |
Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 24182506-24186597 Nucleotide Length: 1206 |
Protein-coding | LOC_Os06g40560 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009056 | catabolic process | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0019538 | protein metabolic process | Biological Process | IEA | |
GO:0016787 | hydrolase activity | Molecular Function | IEA | |
GO:0000166 | nucleotide binding | Molecular Function | IEA | |
GO:0005618 | cell wall | Cellular Component | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005622 | intracellular | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g16190 LOC_Os05g30800 LOC_Os02g11050 LOC_Os04g40850 LOC_Os04g56646 LOC_Os02g38810 LOC_Os03g63430 LOC_Os06g07630 LOC_Os01g32800 LOC_Os03g08280 LOC_Os03g11570 More.. |
Downstream Genes | LOC_Os08g43540 LOC_Os09g36710 LOC_Os08g27090 LOC_Os07g49150 LOC_Os08g43640 LOC_Os07g25420 LOC_Os09g37000 LOC_Os06g48640 LOC_Os08g12820 LOC_Os09g15750 LOC_Os07g36090 More.. |
Database Links | |
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Gramene | LOC_Os06g40560.1 |
Rice Genome Annotation | LOC_Os06g40560.1 |
Ricechip | LOC_Os06g40560.1 |
KEGG | osa:4341487 dosa:Os06t0607800-01 |
Entrez-Gene | 4341487 |