RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g40620.2 View Network Show in Genome Browser |
| Other Names | Os06g0608500 |
| Description | SNF7 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 24218361-24223375 Nucleotide Length: 663 |
| Protein-coding | LOC_Os06g40620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01810 LOC_Os02g38300 LOC_Os05g01250 LOC_Os03g57210 LOC_Os01g01350 LOC_Os03g43860 LOC_Os02g06490 LOC_Os03g21460 LOC_Os05g41510 LOC_Os03g03130 LOC_Os02g49190 More.. |
| Downstream Genes | LOC_Os07g29630 LOC_Os07g13270 LOC_Os10g35250 LOC_Os11g47710 LOC_Os06g43590 LOC_Os10g33660 LOC_Os09g09480 LOC_Os10g39120 LOC_Os07g47580 LOC_Os07g05810 LOC_Os11g26910 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g40620.2 |
| Rice Genome Annotation | LOC_Os06g40620.2 |
| Ricechip | LOC_Os06g40620.2 |
| KEGG | osa:4341494 dosa:Os06t0608500-01 |
| Entrez-Gene | 4341494 |