RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g40640.2 View Network Show in Genome Browser |
| Other Names | Os06g0608700 |
| Description | fructose-bisphospate aldolase isozyme, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 24227231-24229290 Nucleotide Length: 1077 |
| Protein-coding | LOC_Os06g40640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01510 LOC_Os05g44922 LOC_Os01g53680 LOC_Os06g14510 LOC_Os03g56460 LOC_Os05g48630 LOC_Os01g62420 LOC_Os01g09570 LOC_Os06g05860 LOC_Os05g10650 LOC_Os04g30890 More.. |
| Downstream Genes | LOC_Os11g07020 LOC_Os08g34050 LOC_Os09g24910 LOC_Os12g19470 LOC_Os12g19381 LOC_Os10g26570 LOC_Os10g32550 LOC_Os09g36520 LOC_Os06g45710 LOC_Os11g44810 LOC_Os06g46000 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00710 rn01100 rn01120 rn00680 rn00051 rn00010 rn00030 rn01110 |
| Metacyc Pathways | ANAEROFRUCAT-PWY P185-PWY GLUCONEO-PWY PWY-1042 CALVIN-PWY PWY-3801 GLYCOLYSIS |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g40640.2 |
| Rice Genome Annotation | LOC_Os06g40640.2 |
| Ricechip | LOC_Os06g40640.2 |
| KEGG | osa:4341496 dosa:Os06t0608700-01 |
| Entrez-Gene | 4341496 |