RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g41384.1 View Network Show in Genome Browser |
| Other Names | Os06g0618100 |
| Description | zinc finger C-x8-C-x5-C-x3-H type family protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 24808757-24811960 Nucleotide Length: 888 |
| Protein-coding | LOC_Os06g41384 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g23460 LOC_Os03g25970 LOC_Os02g57640 LOC_Os01g38620 LOC_Os01g72240 |
| Downstream Genes | LOC_Os10g41440 LOC_Os08g01930 LOC_Os08g10030 LOC_Os07g07310 LOC_Os07g02360 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g41384.1 |
| Rice Genome Annotation | LOC_Os06g41384.1 |
| Ricechip | LOC_Os06g41384.1 |
| KEGG | osa:4341537 dosa:Os06t0618100-01 |
| Entrez-Gene | 4341537 |