RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g41790.1 View Network Show in Genome Browser |
| Other Names | Os06g0622900 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 25054769-25058851 Nucleotide Length: 828 |
| Protein-coding | LOC_Os06g41790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g38980 LOC_Os02g40900 LOC_Os02g15310 LOC_Os03g05830 LOC_Os02g52140 LOC_Os03g60930 LOC_Os05g01540 LOC_Os06g11620 LOC_Os03g58720 LOC_Os02g07070 LOC_Os03g03140 More.. |
| Downstream Genes | LOC_Os10g30370 LOC_Os06g50890 LOC_Os08g29650 LOC_Os09g37720 LOC_Os12g43340 LOC_Os10g37670 LOC_Os07g30090 LOC_Os07g20170 LOC_Os12g38430 LOC_Os08g37960 LOC_Os08g37700 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g41790.1 |
| Rice Genome Annotation | LOC_Os06g41790.1 |
| Ricechip | LOC_Os06g41790.1 |
| KEGG | osa:4341556 dosa:Os06t0622900-01 |
| Entrez-Gene | 4341556 |