RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g41910.1 View Network Show in Genome Browser |
| Other Names | Os06g0624700 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 25145626-25148023 Nucleotide Length: 1569 |
| Protein-coding | LOC_Os06g41910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g71474 LOC_Os01g39830 LOC_Os01g51840 LOC_Os03g63540 LOC_Os03g01800 LOC_Os03g61620 LOC_Os06g34120 LOC_Os02g58720 LOC_Os03g03164 LOC_Os06g36050 LOC_Os05g02820 More.. |
| Downstream Genes | LOC_Os07g40940 LOC_Os11g26190 LOC_Os11g26340 LOC_Os11g08090 LOC_Os06g42800 LOC_Os10g22590 LOC_Os08g32160 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1860-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g41910.1 |
| Rice Genome Annotation | LOC_Os06g41910.1 |
| Ricechip | LOC_Os06g41910.1 |
| KEGG | osa:4341563 dosa:Os06t0624700-01 |
| Entrez-Gene | 4341563 |