RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g42020.1 View Network Show in Genome Browser |
| Other Names | Os06g0625700 |
| Description | CSLA9 - cellulose synthase-like family A, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 25231214-25235898 Nucleotide Length: 1584 |
| Protein-coding | LOC_Os06g42020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g62090 LOC_Os03g60939 LOC_Os03g60700 LOC_Os01g12070 LOC_Os02g06360 LOC_Os01g43910 LOC_Os04g52230 LOC_Os06g22330 LOC_Os02g48190 LOC_Os01g67240 LOC_Os01g59870 More.. |
| Downstream Genes | LOC_Os07g14850 LOC_Os07g44070 LOC_Os08g40060 LOC_Os07g29750 LOC_Os09g25900 LOC_Os07g10770 LOC_Os10g22590 LOC_Os07g39280 LOC_Os06g42850 LOC_Os12g37650 LOC_Os07g32660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g42020.1 |
| Rice Genome Annotation | LOC_Os06g42020.1 |
| Ricechip | LOC_Os06g42020.1 |
| KEGG | osa:4341571 dosa:Os06t0625700-01 |
| Entrez-Gene | 4341571 |