RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g42720.1 View Network Show in Genome Browser |
| Other Names | Os06g0633800 |
| Description | amino acid transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 25690097-25693908 Nucleotide Length: 1377 |
| Protein-coding | LOC_Os06g42720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60260 LOC_Os02g01100 LOC_Os02g44980 LOC_Os04g47780 LOC_Os02g54730 LOC_Os04g38680 LOC_Os06g12320 LOC_Os03g06139 LOC_Os04g44430 LOC_Os01g41420 LOC_Os01g41400 More.. |
| Downstream Genes | LOC_Os12g38570 LOC_Os11g28980 LOC_Os07g12770 LOC_Os07g29620 LOC_Os08g38720 LOC_Os11g19240 LOC_Os09g10820 LOC_Os08g07010 LOC_Os11g07600 LOC_Os08g36530 LOC_Os08g18044 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g42720.1 |
| Rice Genome Annotation | LOC_Os06g42720.1 |
| Ricechip | LOC_Os06g42720.1 |
| KEGG | osa:4341591 dosa:Os06t0633800-01 |
| Entrez-Gene | 4341591 |