RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g42790.1 View Network Show in Genome Browser |
| Other Names | Os06g0634300 |
| Description | hydrolase, NUDIX family, domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 25718151-25722192 Nucleotide Length: 1131 |
| Protein-coding | LOC_Os06g42790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g04910 LOC_Os04g58640 LOC_Os05g34180 LOC_Os05g11870 LOC_Os01g21820 LOC_Os03g17120 |
| Downstream Genes | LOC_Os08g28840 LOC_Os07g36190 LOC_Os08g28860 LOC_Os11g08980 LOC_Os12g10200 LOC_Os12g35330 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g42790.1 |
| Rice Genome Annotation | LOC_Os06g42790.1 |
| Ricechip | LOC_Os06g42790.1 |
| KEGG | osa:4341595 dosa:Os06t0634300-01 |
| Entrez-Gene | 4341595 |