RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g43210.1 View Network Show in Genome Browser |
| Other Names | Os06g0639100 |
| Description | zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 25967860-25974644 Nucleotide Length: 3267 |
| Protein-coding | LOC_Os06g43210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g37900 LOC_Os04g59580 LOC_Os01g53130 |
| Downstream Genes | LOC_Os10g34030 LOC_Os08g29590 LOC_Os12g07300 LOC_Os11g39020 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 osa-miR815a osa-miR815b osa-miR815c |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g43210.1 |
| Rice Genome Annotation | LOC_Os06g43210.1 |
| Ricechip | LOC_Os06g43210.1 |
| KEGG | dosa:Os06t0639100-02 |