RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g43600.1 View Network Show in Genome Browser |
| Other Names | Os06g0643500 |
| Description | LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26227104-26228760 Nucleotide Length: 768 |
| Protein-coding | LOC_Os06g43600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08470 LOC_Os01g52660 LOC_Os04g33520 LOC_Os01g02040 LOC_Os02g53200 LOC_Os03g19200 LOC_Os02g16500 LOC_Os04g55230 |
| Downstream Genes | LOC_Os11g43640 LOC_Os10g28230 LOC_Os09g38450 LOC_Os12g31810 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g43600.1 |
| Rice Genome Annotation | LOC_Os06g43600.1 |
| Ricechip | LOC_Os06g43600.1 |
| KEGG | osa:4341639 dosa:Os06t0643500-01 |
| Entrez-Gene | 4341639 |