RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g43610.1 View Network Show in Genome Browser |
| Other Names | Os06g0643600 |
| Description | formamidopyrimidine-DNA glycosylase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26229857-26232885 Nucleotide Length: 1203 |
| Protein-coding | LOC_Os06g43610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g74520 LOC_Os04g54500 LOC_Os03g46640 LOC_Os03g12610 LOC_Os03g19680 LOC_Os01g72800 LOC_Os06g09910 LOC_Os01g65400 LOC_Os02g56200 LOC_Os04g42870 LOC_Os05g01110 More.. |
| Downstream Genes | LOC_Os12g19370 LOC_Os08g07850 LOC_Os08g07840 LOC_Os07g12530 LOC_Os07g27480 LOC_Os07g25430 LOC_Os09g33460 LOC_Os07g37180 LOC_Os11g11000 LOC_Os09g35000 LOC_Os08g29530 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g43610.1 |
| Rice Genome Annotation | LOC_Os06g43610.1 |
| Ricechip | LOC_Os06g43610.1 |
| KEGG | osa:4341640 dosa:Os06t0643600-01 |
| Entrez-Gene | 4341640 |