RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g43630.1 View Network Show in Genome Browser |
| Other Names | Os06g0643800 |
| Description | sucrose-phosphate synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26242005-26250269 Nucleotide Length: 2934 |
| Protein-coding | LOC_Os06g43630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g09450 LOC_Os02g58480 LOC_Os03g28330 LOC_Os04g24430 LOC_Os03g22120 LOC_Os01g69030 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 |
| Metacyc Pathways | SUCSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g43630.1 |
| Rice Genome Annotation | LOC_Os06g43630.1 |
| Ricechip | LOC_Os06g43630.1 |
| KEGG | osa:4341642 dosa:Os06t0643800-01 |
| Entrez-Gene | 4341642 |