RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g43640.1 View Network Show in Genome Browser |
| Other Names | Os06g0643900 |
| Description | Ser/Thr protein phosphatase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26254119-26259281 Nucleotide Length: 1431 |
| Protein-coding | LOC_Os06g43640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05840 LOC_Os03g63680 LOC_Os02g04160 LOC_Os05g08370 LOC_Os03g48380 LOC_Os04g55410 LOC_Os04g55720 LOC_Os03g09210 LOC_Os03g17310 |
| Downstream Genes | LOC_Os08g32930 LOC_Os09g38740 LOC_Os08g27850 LOC_Os08g09240 LOC_Os12g01530 LOC_Os10g36100 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1869 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g43640.1 |
| Rice Genome Annotation | LOC_Os06g43640.1 |
| Ricechip | LOC_Os06g43640.1 |
| KEGG | osa:4341643 dosa:Os06t0643900-01 |
| Entrez-Gene | 4341643 |