RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g43660.3 View Network Show in Genome Browser |
| Other Names | Os06g0644200 |
| Description | inorganic H+ pyrophosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26272900-26278666 Nucleotide Length: 2163 |
| Protein-coding | LOC_Os06g43660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g37434 |
| Downstream Genes | LOC_Os07g30790 LOC_Os10g04620 LOC_Os11g35930 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1862e |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g43660.3 |
| Rice Genome Annotation | LOC_Os06g43660.3 |
| Ricechip | LOC_Os06g43660.3 |
| KEGG | osa:4341645 dosa:Os06t0644200-01 |
| Entrez-Gene | 4341645 |