RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g43680.1 View Network Show in Genome Browser |
| Other Names | Os06g0644500 |
| Description | palmitoyltransferase TIP1, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26296679-26303260 Nucleotide Length: 1950 |
| Protein-coding | LOC_Os06g43680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g24900 LOC_Os03g58960 LOC_Os03g46650 LOC_Os03g17020 LOC_Os01g70100 LOC_Os05g26890 LOC_Os02g08270 LOC_Os02g24190 LOC_Os03g18550 LOC_Os05g01310 LOC_Os03g62250 More.. |
| Downstream Genes | LOC_Os09g33450 LOC_Os08g42620 LOC_Os08g42370 LOC_Os12g40780 LOC_Os09g38440 LOC_Os10g40590 LOC_Os07g10540 LOC_Os11g32960 LOC_Os12g40770 LOC_Os10g30090 LOC_Os12g03730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g43680.1 |
| Rice Genome Annotation | LOC_Os06g43680.1 |
| Ricechip | LOC_Os06g43680.1 |
| KEGG | osa:4341648 dosa:Os06t0644500-01 |
| Entrez-Gene | 4341648 |