RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g43900.1 View Network Show in Genome Browser |
| Other Names | Os06g0647100 |
| Description | ribosomal protein L35, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26442595-26444898 Nucleotide Length: 441 |
| Protein-coding | LOC_Os06g43900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g53280 LOC_Os05g45220 LOC_Os02g01110 LOC_Os02g55120 LOC_Os02g33500 LOC_Os05g48510 LOC_Os01g59060 LOC_Os03g10060 LOC_Os01g54540 LOC_Os04g38750 LOC_Os02g04460 More.. |
| Downstream Genes | LOC_Os08g19850 LOC_Os12g34860 LOC_Os10g26130 LOC_Os10g42860 LOC_Os09g10760 LOC_Os09g32988 LOC_Os08g25900 LOC_Os11g34940 LOC_Os09g24530 LOC_Os08g29200 LOC_Os07g28610 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g43900.1 |
| Rice Genome Annotation | LOC_Os06g43900.1 |
| Ricechip | LOC_Os06g43900.1 |
| KEGG | osa:4341664 dosa:Os06t0647100-01 |
| Entrez-Gene | 4341664 |