RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g44140.1 View Network Show in Genome Browser |
| Other Names | Os06g0650600 |
| Description | transmembrane 9 superfamily member, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26631938-26634878 Nucleotide Length: 1938 |
| Protein-coding | LOC_Os06g44140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28750 LOC_Os01g19840 LOC_Os03g45170 LOC_Os04g51630 LOC_Os04g40730 LOC_Os05g38520 LOC_Os01g62350 LOC_Os02g38440 LOC_Os02g47940 LOC_Os01g70380 LOC_Os03g09140 More.. |
| Downstream Genes | LOC_Os10g30090 LOC_Os08g13690 LOC_Os12g38000 LOC_Os12g42850 LOC_Os12g15590 LOC_Os07g31370 LOC_Os11g31640 LOC_Os09g31130 LOC_Os11g48090 LOC_Os09g21110 LOC_Os06g49140 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g44140.1 |
| Rice Genome Annotation | LOC_Os06g44140.1 |
| Ricechip | LOC_Os06g44140.1 |
| KEGG | osa:4341685 dosa:Os06t0650600-01 |
| Entrez-Gene | 4341685 |