RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g44260.1 View Network Show in Genome Browser |
| Other Names | Os06g0652300 |
| Description | synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26698962-26700042 Nucleotide Length: 1044 |
| Protein-coding | LOC_Os06g44260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g04620 LOC_Os04g30550 LOC_Os02g57990 LOC_Os06g25439 LOC_Os02g57180 LOC_Os03g29170 LOC_Os04g10010 LOC_Os03g18740 LOC_Os04g10000 LOC_Os05g51670 LOC_Os04g33240 More.. |
| Downstream Genes | LOC_Os07g49120 LOC_Os08g28730 LOC_Os09g15420 LOC_Os10g01044 LOC_Os09g35800 LOC_Os09g34090 LOC_Os08g20200 LOC_Os08g44360 LOC_Os09g39410 LOC_Os06g49120 LOC_Os07g30600 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00052 rn00520 rn01100 rn01110 rn00051 |
| Metacyc Pathways | DTDPRHAMSYN-PWY UDPNACETYLGALSYN-PWY PWY-3821 P61-PWY GALACTMETAB-PWY PWY-66 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g44260.1 |
| Rice Genome Annotation | LOC_Os06g44260.1 |
| Ricechip | LOC_Os06g44260.1 |
| KEGG | osa:4341698 dosa:Os06t0652300-00 |
| Entrez-Gene | 4341698 |