RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g44280.1 View Network Show in Genome Browser |
| Other Names | Os06g0652600 |
| Description | retrotransposon protein, putative, Ty3-gypsy subclass, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26714866-26717570 Nucleotide Length: 1557 |
| Protein-coding | LOC_Os06g44280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40830 LOC_Os06g15990 LOC_Os02g01010 LOC_Os06g36050 LOC_Os02g32120 LOC_Os04g58110 LOC_Os04g58480 LOC_Os05g38150 LOC_Os04g41960 LOC_Os02g54530 LOC_Os01g73230 More.. |
| Downstream Genes | LOC_Os10g25200 LOC_Os10g39170 LOC_Os08g09190 LOC_Os07g04240 LOC_Os11g09280 LOC_Os07g14340 LOC_Os10g31420 LOC_Os07g49520 LOC_Os12g05810 LOC_Os10g31440 LOC_Os07g29620 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2873c |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g44280.1 |
| Rice Genome Annotation | LOC_Os06g44280.1 |
| Ricechip | LOC_Os06g44280.1 |
| KEGG | osa:4341701 dosa:Os06t0652600-01 |
| Entrez-Gene | 4341701 |