RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g44374.1 View Network Show in Genome Browser |
| Other Names | Os06g0653900 |
| Description | protein transport protein SEC61 subunit gamma, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26782832-26784850 Nucleotide Length: 210 |
| Protein-coding | LOC_Os06g44374 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g42320 LOC_Os03g26970 LOC_Os03g42320 LOC_Os03g11440 LOC_Os06g39260 LOC_Os01g67134 LOC_Os05g06440 LOC_Os03g36730 LOC_Os02g48110 LOC_Os03g01180 LOC_Os06g05740 More.. |
| Downstream Genes | LOC_Os09g17840 LOC_Os09g17830 LOC_Os08g17680 LOC_Os07g10830 LOC_Os07g08430 LOC_Os09g27830 LOC_Os09g19734 LOC_Os06g49480 LOC_Os11g37920 LOC_Os11g09280 LOC_Os07g48244 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g44374.1 |
| Rice Genome Annotation | LOC_Os06g44374.1 |
| Ricechip | LOC_Os06g44374.1 |
| KEGG | osa:4341707 dosa:Os06t0653900-01 |
| Entrez-Gene | 4341707 |