RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g44500.1 View Network Show in Genome Browser |
| Other Names | Os06g0655500 |
| Description | OsFBK17 - F-box domain and kelch repeat containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 26876995-26878985 Nucleotide Length: 1155 |
| Protein-coding | LOC_Os06g44500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009605 | response to external stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g37630 LOC_Os03g61760 LOC_Os06g03540 LOC_Os01g25360 LOC_Os01g21990 LOC_Os04g43030 LOC_Os03g53300 LOC_Os03g03670 LOC_Os06g03560 LOC_Os01g37650 |
| Downstream Genes | LOC_Os07g47540 LOC_Os12g02350 LOC_Os11g16290 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g44500.1 |
| Rice Genome Annotation | LOC_Os06g44500.1 |
| Ricechip | LOC_Os06g44500.1 |
| KEGG | osa:4341715 dosa:Os06t0655500-01 |
| Entrez-Gene | 4341715 |