RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g44840.1 View Network Show in Genome Browser |
| Other Names | Os06g0658900 |
| Description | prenyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 27087455-27092919 Nucleotide Length: 1215 |
| Protein-coding | LOC_Os06g44840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g34390 LOC_Os03g09060 LOC_Os06g39906 |
| Downstream Genes | LOC_Os08g23320 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00130 rn01100 rn01110 |
| Metacyc Pathways | PWY-1422 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g44840.1 |
| Rice Genome Annotation | LOC_Os06g44840.1 |
| Ricechip | LOC_Os06g44840.1 |
| KEGG | osa:4341727 dosa:Os06t0658900-01 |
| Entrez-Gene | 4341727 |