RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g44880.1 View Network Show in Genome Browser |
| Other Names | Os06g0659200 |
| Description | type II intron maturase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 27126260-27130156 Nucleotide Length: 2646 |
| Protein-coding | LOC_Os06g44880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g44870 LOC_Os01g37820 LOC_Os03g38020 LOC_Os01g65830 LOC_Os06g14620 LOC_Os01g17170 LOC_Os01g69080 LOC_Os06g03720 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g44880.1 |
| Rice Genome Annotation | LOC_Os06g44880.1 |
| Ricechip | LOC_Os06g44880.1 |
| KEGG | osa:4341730 dosa:Os06t0659200-01 |
| Entrez-Gene | 4341730 |