RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g45080.1 View Network Show in Genome Browser |
| Other Names | Os06g0661700 |
| Description | rabGAP/TBC domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 27265304-27269905 Nucleotide Length: 2238 |
| Protein-coding | LOC_Os06g45080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22800 LOC_Os03g43570 LOC_Os04g32690 LOC_Os04g52370 LOC_Os01g74110 LOC_Os04g38620 LOC_Os03g46750 LOC_Os05g36190 LOC_Os06g11520 LOC_Os06g44060 LOC_Os04g59130 More.. |
| Downstream Genes | LOC_Os07g47110 LOC_Os08g41500 LOC_Os07g09720 LOC_Os07g03070 LOC_Os09g23690 LOC_Os12g06630 LOC_Os08g01290 LOC_Os11g18880 LOC_Os11g06420 LOC_Os11g08330 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g45080.1 |
| Rice Genome Annotation | LOC_Os06g45080.1 |
| Ricechip | LOC_Os06g45080.1 |
| KEGG | osa:4341748 dosa:Os06t0661700-01 |
| Entrez-Gene | 4341748 |