RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g45100.1 View Network Show in Genome Browser |
| Other Names | Os06g0661800 |
| Description | FAD binding domain of DNA photolyase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 27275439-27278872 Nucleotide Length: 1749 |
| Protein-coding | LOC_Os06g45100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40860 LOC_Os04g45490 |
| Downstream Genes | LOC_Os10g08580 LOC_Os11g11000 LOC_Os12g16650 LOC_Os07g29220 LOC_Os07g29200 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g45100.1 |
| Rice Genome Annotation | LOC_Os06g45100.1 |
| Ricechip | LOC_Os06g45100.1 |
| KEGG | osa:4341749 dosa:Os06t0661800-01 |
| Entrez-Gene | 4341749 |