RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g45340.1 View Network Show in Genome Browser |
| Other Names | Os06g0663800 |
| Description | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 27402362-27403746 Nucleotide Length: 657 |
| Protein-coding | LOC_Os06g45340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10060 LOC_Os03g62630 LOC_Os01g59060 LOC_Os03g03020 LOC_Os03g14040 LOC_Os04g38750 LOC_Os03g36540 LOC_Os03g25140 LOC_Os01g48690 LOC_Os03g55930 LOC_Os02g43600 More.. |
| Downstream Genes | LOC_Os09g10760 LOC_Os08g25900 LOC_Os09g32988 LOC_Os12g29760 LOC_Os07g30670 LOC_Os09g26810 LOC_Os09g34140 LOC_Os10g32400 LOC_Os10g32348 LOC_Os08g29370 LOC_Os09g01670 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g45340.1 |
| Rice Genome Annotation | LOC_Os06g45340.1 |
| Ricechip | LOC_Os06g45340.1 |
| KEGG | osa:4341766 dosa:Os06t0663800-01 |
| Entrez-Gene | 4341766 |