RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g45370.1 View Network Show in Genome Browser |
| Other Names | Os06g0664200 |
| Description | fructose-1,6-bisphosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 27428887-27431108 Nucleotide Length: 1206 |
| Protein-coding | LOC_Os06g45370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g20100 LOC_Os06g22690 LOC_Os03g03020 LOC_Os01g48690 LOC_Os01g72800 LOC_Os03g56840 LOC_Os03g60100 LOC_Os02g57670 LOC_Os03g24020 LOC_Os01g58020 |
| Downstream Genes | LOC_Os07g06450 LOC_Os06g46930 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn00030 rn00051 rn01100 rn01110 rn01120 rn00680 rn00710 |
| Metacyc Pathways | P185-PWY GLUCONEO-PWY CALVIN-PWY GLYCOLYSIS PWY-5484 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g45370.1 |
| Rice Genome Annotation | LOC_Os06g45370.1 |
| Ricechip | LOC_Os06g45370.1 |
| KEGG | osa:4341770 dosa:Os06t0664200-01 |
| Entrez-Gene | 4341770 |