RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g45380.2 View Network Show in Genome Browser |
| Other Names | Os06g0664300 |
| Description | vacuolar-sorting receptor precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 27435593-27441148 Nucleotide Length: 1503 |
| Protein-coding | LOC_Os06g45380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g41500 LOC_Os03g58580 LOC_Os04g58090 LOC_Os02g38230 LOC_Os03g01180 LOC_Os01g74200 LOC_Os01g58730 LOC_Os03g51430 LOC_Os02g08180 LOC_Os02g58730 LOC_Os02g20850 More.. |
| Downstream Genes | LOC_Os11g37920 LOC_Os09g27830 LOC_Os09g29370 LOC_Os09g22450 LOC_Os12g43930 LOC_Os10g27340 LOC_Os10g34040 LOC_Os07g08430 LOC_Os07g35580 LOC_Os10g38930 LOC_Os08g17680 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g45380.2 |
| Rice Genome Annotation | LOC_Os06g45380.2 |
| Ricechip | LOC_Os06g45380.2 |
| KEGG | osa:4341771 dosa:Os06t0664300-01 |
| Entrez-Gene | 4341771 |