RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os06g45590.1 View Network Show in Genome Browser
Other Names	Os06g0666600
Description	glyceraldehyde-3-phosphate dehydrogenase, putative, expressed
Gene Attributes	Chromosome: Chr6 CDS Coordinates (5'-3'): 27601120-27605337 Nucleotide Length: 1248
Protein-coding	LOC_Os06g45590

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0006091	generation of precursor metabolites and energy	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g07260 LOC_Os05g41640 LOC_Os01g58610 LOC_Os04g46560 LOC_Os03g56810 LOC_Os02g07060 LOC_Os03g51600 LOC_Os02g07490 LOC_Os03g01530 LOC_Os01g62420 LOC_Os01g59150 More..
Downstream Genes	LOC_Os06g45710 LOC_Os06g46000 LOC_Os10g30550 LOC_Os11g14220 LOC_Os11g04070 LOC_Os08g03640 LOC_Os12g03880 LOC_Os12g43630 LOC_Os07g46990 LOC_Os09g36450 LOC_Os12g43340 More..

Pathways
KEGG Pathways	rn00300 rn01100 rn01110 rn01120 rn00010 rn00710
Metacyc Pathways	DAPLYSINESYN-PWY PWY-5097 PWY-2941 P124-PWY ANAEROFRUCAT-PWY GLUCONEO-PWY PWY-1042 PWY-3801 GLYCOLYSIS

Database Links
Gramene	LOC_Os06g45590.1
Rice Genome Annotation	LOC_Os06g45590.1
Ricechip	LOC_Os06g45590.1
KEGG	osa:4341782 dosa:Os06t0666600-01
Entrez-Gene	4341782